BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004E03LP1|AL425257
(1005 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1327 1902 0.0
>3x_Contig1327
Length = 7237
Score = 1902 bits (958), Expect = 0.0
Identities = 984/990 (99%), Gaps = 3/990 (0%)
Strand = Plus / Plus
Query: 1 acgccattcagaccatcaagagaacctggccaaaggtagtgcaaagacgattcgaaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4932 acgccattcagaccatcaagagaacctggccaaaggtagtgcaaagacgattcgaaaaga 4991
Query: 61 tttgcgaattgaaagaatatgtttttagccagagaaggaaacaatcaacgactcaacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4992 tttgcgaattgaaagaatatgtttttagccagagaaggaaacaatcaacgactcaacaaa 5051
Query: 121 cgtctactttaaatctaggtataccctcctcaactacagtgccaatctatagctcggact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5052 cgtctactttaaatctaggtataccctcctcaactacagtgccaatctatagctcggact 5111
Query: 181 tcgccgatacaaatgctcatccttcgggctctacagtaccgaaaatgaccttcgacgaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5112 tcgccgatacaaatgctcatccttcgggctctacagtaccgaaaatgaccttcgacgaac 5171
Query: 241 ttctcagcagcttatttgacggcgacacggattttcaatcgctcctcttcgagacactcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5172 ttctcagcagcttatttgacggcgacacggattttcaatcgctcctcttcgagacactcc 5231
Query: 301 cgaacaatttgtaataaaaagaagtaccaaacctactacatcctaaataatactaatcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5232 cgaacaatttgtaataaaaagaagtaccaaacctactacatcctaaataatactaatcta 5291
Query: 361 cataaccccatggtttcattttgtaccatcctcatactctcacggtcactatcatgtcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5292 cataaccccatggtttcattttgtaccatcctcatactctcacggtcactatcatgtcat 5351
Query: 421 ttaccattaaaatgagtttccacgtgaccccagattacttgatcgatttttctttccgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5352 ttaccattaaaatgagtttccacgtgaccccagattacttgatcgatttttctttccgtt 5411
Query: 481 tttatgacgtaatgctcgatctttcatatatcaccgattcttcaaatgatagttttgaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5412 tttatgacgtaatgctcgatctttcatatatcaccgattcttcaaatgatagttttgaag 5471
Query: 541 cccgttaccgttgaaagaatgctcatcgacaacaaactaacacgttcatttatacccttt 600
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5472 cccgtaaccgttgaaagaatgctcatcgacaacaaactaacacgttcatttatacccttt 5531
Query: 601 agctggacgtttatgaactgcggacttgttctatctttctaagcgttatatttaatagta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5532 agctggacgtttatgaactgcggacttgttctatctttctaagcgttatatttaatagta 5591
Query: 661 cttctgatagcagttctgtcttggccaggtattctttcatattgacagcttaatcagagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5592 cttctgatagcagttctgtcttggccaggtattctttcatattgacagcttaatcagagg 5651
Query: 721 ctgaaagaaactaaggattaggaggttcggatcgaataggtttaatgggatcagagtttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5652 ctgaaagaaactaaggattaggaggttcggatcgaataggtttaatgggatcagagtttt 5711
Query: 781 agaaggaaaattgattttacttggattatagtctgataccaccgataaactaattactga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5712 agaaggaaaattgattttacttggattatagtctgataccaccgataaactaattactga 5771
Query: 841 tagaataatgagcgccatggagaataggaagaactctttgcatggtagtccgaacggctt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5772 tagaataatgagcgccatggagaataggaagaactctttgcatggtagtccgaacggctt 5831
Query: 901 aagtgggttgaatatggttttgccgagggagggcga-tycaataatgggataatgac-ac 958
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||
Sbjct: 5832 aagtgggttgaatatggttttgccgagggagggcgattccaataatgggataatgacaac 5891
Query: 959 agaagatgcgagaaat-gcaaattaarggg 987
|||||||||||||||| ||||||||| |||
Sbjct: 5892 agaagatgcgagaaatggcaaattaaaggg 5921
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6726
Number of Sequences: 1807
Number of extensions: 6726
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 1005
length of database: 10,358,551
effective HSP length: 16
effective length of query: 989
effective length of database: 10,329,639
effective search space: 10216012971
effective search space used: 10216012971
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)